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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888823.1_cds_XP_016443446.1_38607
CDS Infomation

[gene=LOC107768804] [db_xref=GeneID:107768804] [protein=glycerol-3-phosphate acyltransferase, chloroplastic-like isoform X2] [protein_id=XP_016443446.1] [location=complement(join(78833..78967,80985..81098,81175..81294,82932..83010,83688..83798,83884..83945,84034..84135,85317..85374,87078..87175,87320..87406,88371..88468,91954..92296))] [gbkey=CDS]
Sequence

ATGTTGATCCTCTCTGCGTCTCCTTCTTCCTCCACTCTCTCTTCTTTTTCTTCTTCACAC
ATTTCTAGGCCTTTAATTTCTTCCTCATCTTCATCTTCTGCTTCATTTTCAACTTCTCTA
CCAGTAGTAGCAGTCAAAGCTGGTGCGAGGCTACTGTCAATTCGGAAGTTACGGTGTGCG
ATTTTCTGTGCTTCCAAGGTTCGTGGAATGGCTGAAATAGTTGAAGAGAAGAAGGAATCG
AATTCAACTGCTGCTGCTGCCGCCGCCGCCGTCGCAGTTTCTACTTCTGAGAATCATGAG
CTTCCACAGTTGCGTGCCTTCCTTGACGCTCGTACTGGAGAAGACTTGCTATCTGCTATT
CGGAAAGCAGTGGAAGATGAAAAACTGCCGCTTAATGTTGCTGAAGGGATGGAGGAGTTG
TATCAGAACTATCGGAATGCAGTTTTACAAAGTGGAGTACCCAAAGCAGATGAGATCGTT
TTGTATAACATGGCTCTTGTGTTGGATCGTATTTTTGTGGATGTGAAGGATCCTTTTGAG
TTCTCGCCACATCATAAGGCCATTCGTGAACCTTTTGACTATTACAAGTTTGGCCAAAAT
TATATCCGCCCTTTACTTGATTTCAGGAGTTCTTATGTTGGCAATATATCAGTTTTTGGT
GAAATAGAAGAAAAGCTCAAGCAGGGCGATAATGTTGTTTTGATGTCAAACCATCAAAGT
GAAGCAGATCCAGCGGTTATTGCTCTGTTGCTTGAATCGAAGCACCCATACATTGCTGAG
AACATAATCTATGTTGCAGGAGATAGAGTTATTACTGATCCTCTTTGCAAGCCATTCAGC
ATGGGAAGGAATCTCCTGTGTGTTTATTCGAAAAAACATATGGGTGATGACCCCAAACTT
GTCGAGAAGAAAAAGAGAGCAAACACAAGAAGCTTGAAGGAGATGGCTGTGCTATTGAGG
GGTGGATCAAAACTAATATGGATTGCTCCTAGTGGTGGAAGAGATAGGCCAAACCCTGTT
ACAAAAGAATGGTATCCAGCGCCATTTGATGCTTCCTCAACAGACAACATGAGAAGGCTT
GTAGAACATGCTGGAGTCCCTGGTCACATTTATCCTCTAGCAATATTATGCTATGATATT
ATGCCCCCTCCGCCCCAGGTTGAGAAAAATATTGGAGAGAAAAGAATAATATCTTTTCAT
GGAACTGGCATATCCGTGGGGACCAAAATTGATTTTCACGAGGTTGCTGGTGCTTTGGAA
GACCCTGAAGAGGCTAAGATGGTCTACACAAAGGCACTTTATAACTCTGTAAACCAGCAG
TACAACGTGCTAAATTCTGCTATACATGGCAAACAAGGACAGGAGGCATCAACTCCCAGC
ATTTCGTTATCACAACCATGGCAGTAG

Peptide Sequence

PEP ID

XP_016443446.1
PEP Infomation

PREDICTED: glycerol-3-phosphate acyltransferase, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MLILSASPSSSTLSSFSSSHISRPLISSSSSSSASFSTSLPVVAVKAGARLLSIRKLRCA
IFCASKVRGMAEIVEEKKESNSTAAAAAAAVAVSTSENHELPQLRAFLDARTGEDLLSAI
RKAVEDEKLPLNVAEGMEELYQNYRNAVLQSGVPKADEIVLYNMALVLDRIFVDVKDPFE
FSPHHKAIREPFDYYKFGQNYIRPLLDFRSSYVGNISVFGEIEEKLKQGDNVVLMSNHQS
EADPAVIALLLESKHPYIAENIIYVAGDRVITDPLCKPFSMGRNLLCVYSKKHMGDDPKL
VEKKKRANTRSLKEMAVLLRGGSKLIWIAPSGGRDRPNPVTKEWYPAPFDASSTDNMRRL
VEHAGVPGHIYPLAILCYDIMPPPPQVEKNIGEKRIISFHGTGISVGTKIDFHEVAGALE
DPEEAKMVYTKALYNSVNQQYNVLNSAIHGKQGQEASTPSISLSQPWQ

Transcript Sequence

Gene sequence data has not been registered.